Index

A

annotations (bioscience.base.models.Dataset property)

B

bcca() (in module bioscience.dataMining.biclustering.Biclustering) bibit() (in module bioscience.dataMining.biclustering.Biclustering) Bicluster (class in bioscience.base.models) BiclusteringModel (class in bioscience.base.models) binarize() (in module bioscience.preprocess.Binarization) binarizeLevels() (in module bioscience.preprocess.Binarization) bioscience.base.files module bioscience.base.models module

bioscience.dataMining.biclustering.BiBit module bioscience.dataMining.biclustering.Biclustering module bioscience.preprocess.Binarization module bioscience.preprocess.RnaSeq module bioscience.preprocess.Standard module

C

cols (bioscience.base.models.Bicluster property) columnsNames (bioscience.base.models.Dataset property)

cpm() (in module bioscience.preprocess.RnaSeq) cut (bioscience.base.models.Dataset property)

D

data (bioscience.base.models.Bicluster property) (bioscience.base.models.Dataset property)

Dataset (class in bioscience.base.models) deseq2Norm() (in module bioscience.preprocess.RnaSeq) discretize() (in module bioscience.preprocess.Standard)

E

executionTime (bioscience.base.models.BiclusteringModel property)

F

fpkm() (in module bioscience.preprocess.RnaSeq)

G

geneNames (bioscience.base.models.Dataset property)

L

lengths (bioscience.base.models.Dataset property)

load() (in module bioscience.base.files)

M

measure (bioscience.base.models.Validation property) module bioscience.base.files bioscience.base.models bioscience.dataMining.biclustering.BiBit bioscience.dataMining.biclustering.Biclustering bioscience.preprocess.Binarization bioscience.preprocess.RnaSeq bioscience.preprocess.Standard

N

normalDistributionQuantile() (in module bioscience.preprocess.Standard)

O

original (bioscience.base.models.Dataset property)

outliers() (in module bioscience.preprocess.Standard)

P

processBiBit() (in module bioscience.dataMining.biclustering.BiBit)

R

results (bioscience.base.models.BiclusteringModel property)

rows (bioscience.base.models.Bicluster property)

S

saveBinaryDatasets() (in module bioscience.base.files) saveGenes() (in module bioscience.base.files) saveResults() (in module bioscience.base.files) saveResultsIndex() (in module bioscience.base.files)

scale() (in module bioscience.preprocess.Standard) sizeBicluster() (bioscience.base.models.Bicluster method) sort() (bioscience.base.models.Bicluster method) standardize() (in module bioscience.preprocess.Standard)

T

threadsPerDevice_64() (in module bioscience.dataMining.biclustering.BiBit)

tpm() (in module bioscience.preprocess.RnaSeq)

V

Validation (class in bioscience.base.models)

validations (bioscience.base.models.Bicluster property) value (bioscience.base.models.Validation property)